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  5. Pnu_g20212

Pnu_g20212


Description : component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT) activation complex & original description: none


Gene families : OG0004396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20212

Target Alias Description ECC score Gene Family Method Actions
Adi_g011434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G021600.1 Ceric.12G021600 component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.02 OrthoFinder output from all 47 species
Cre07.g340550 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g14866 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.05 OrthoFinder output from all 47 species
LOC_Os06g30020.1 LOC_Os06g30020 component ZCCHC8 of Nuclear Exosome Targeting (NEXT)... 0.02 OrthoFinder output from all 47 species
Ore_g23549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38534 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.02 OrthoFinder output from all 47 species
Pir_g25221 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.02 OrthoFinder output from all 47 species
Tin_g11945 No alias component *(ZCCHC8) of Nuclear Exosome TargeTing (NEXT)... 0.03 OrthoFinder output from all 47 species
Zm00001e022737_P001 Zm00001e022737 component ZCCHC8 of Nuclear Exosome Targeting (NEXT)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006568 PSP_pro-rich 416 455
No external refs found!