Gb_28643


Description : no hits & (original description: none)


Gene families : OG_01_0002948 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002948_tree ,
OG_02_0002190 (LandPlants) Phylogenetic Tree(s): OG_02_0002190_tree ,
OG_03_0001234 (SeedPlants) Phylogenetic Tree(s): OG_03_0001234_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28643
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
ATMG00750 ORF119 GAG/POL/ENV polyprotein 0.03 Archaeplastida
ChrSy.fgenesh.mRNA.64 No alias no hits & (original description: none) 0.04 Archaeplastida
ChrSy.fgenesh.mRNA.77 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_02591 No alias no hits & (original description: none) 0.13 Archaeplastida
Gb_09799 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_19575 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_21277 No alias no hits & (original description: none) 0.13 Archaeplastida
Gb_23142 No alias no hits & (original description: none) 0.16 Archaeplastida
Gb_24937 No alias no hits & (original description: none) 0.16 Archaeplastida
Gb_24991 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_26876 No alias no hits & (original description: none) 0.12 Archaeplastida
Gb_40582 No alias no hits & (original description: none) 0.21 Archaeplastida
Gb_02591 No alias no hits & (original description: none) 0.13 LandPlants
Gb_09799 No alias no hits & (original description: none) 0.05 LandPlants
Gb_19575 No alias no hits & (original description: none) 0.08 LandPlants
Gb_21277 No alias no hits & (original description: none) 0.08 LandPlants
Gb_23142 No alias no hits & (original description: none) 0.14 LandPlants
Gb_24937 No alias no hits & (original description: none) 0.16 LandPlants
Gb_24991 No alias no hits & (original description: none) 0.04 LandPlants
Gb_26876 No alias no hits & (original description: none) 0.12 LandPlants
Gb_40582 No alias no hits & (original description: none) 0.21 LandPlants
Gb_02591 No alias no hits & (original description: none) 0.13 SeedPlants
Gb_09799 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_19575 No alias no hits & (original description: none) 0.08 SeedPlants
Gb_21277 No alias no hits & (original description: none) 0.08 SeedPlants
Gb_23142 No alias no hits & (original description: none) 0.14 SeedPlants
Gb_24937 No alias no hits & (original description: none) 0.16 SeedPlants
Gb_24991 No alias no hits & (original description: none) 0.04 SeedPlants
Gb_26876 No alias no hits & (original description: none) 0.12 SeedPlants
Gb_40582 No alias no hits & (original description: none) 0.21 SeedPlants

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 151 261
IPR041588 Integrase_H2C2 77 132
No external refs found!