MA_81514g0010


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. CHLORORESPIRATORY REDUCTION22 (CRR22)


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_81514g0010
Cluster HCCA cluster: Cluster_488

Target Alias Description ECC score Gene Family Method Actions
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.06 Gene family
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT4G13650 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
Cpa|evm.model.tig00021435.54 No alias No description available 0.02 Gene family
LOC_Os01g10800 Os01g0205200 No description available 0.03 Gene family
LOC_Os02g53050 Os02g0769900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os04g39410 Os04g0469400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os05g50950 Os05g0586900 No description available 0.02 Gene family
MA_105629g0010 No alias 35.1.27 not assigned.no ontology.tetratricopeptide... 0.03 Gene family
Smo47998 PACid_15423210 No description available 0.02 Gene family
Solyc03g111210.3.1 Solyc03g111210.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc11g008940.1.1 Solyc11g008940.1 No description available 0.03 Gene family
Solyc11g011860.1.1 Solyc11g011860.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc11g066920.1.1 Solyc11g066920.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc12g006575.1.1 Solyc12g006575.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d031535 GRMZM2G076257 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 255 280
IPR002885 Pentatricopeptide_repeat 548 571
IPR002885 Pentatricopeptide_repeat 282 307
IPR002885 Pentatricopeptide_repeat 180 226
IPR002885 Pentatricopeptide_repeat 372 419
IPR002885 Pentatricopeptide_repeat 473 520
IPR002885 Pentatricopeptide_repeat 79 125
IPR032867 DYW_dom 646 770
No external refs found!