Gb_28461


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 100.0)


Gene families : OG_01_0000390 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000390_tree ,
OG_02_0000129 (LandPlants) Phylogenetic Tree(s): OG_02_0000129_tree ,
OG_03_0000040 (SeedPlants) Phylogenetic Tree(s): OG_03_0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28461
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Gb_00583 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Gb_01443 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_02770 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_02905 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_04812 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Gb_04911 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 Archaeplastida
Gb_05094 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_05692 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Gb_06720 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_06760 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_08180 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_08424 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_10082 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_10404 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_13743 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_15469 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Gb_16634 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_18380 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_18456 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_19120 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.14 Archaeplastida
Gb_20651 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Gb_21218 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_21357 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Gb_25155 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Gb_25845 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_25861 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_26007 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_29132 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_29291 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_29642 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_30626 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.14 Archaeplastida
Gb_31730 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_32699 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_32952 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Gb_33153 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_33272 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_34479 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_34971 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_36489 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Gb_36670 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_38490 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_39390 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_39849 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Gb_40169 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_40420 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_41711 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_00583 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 LandPlants
Gb_02770 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_02905 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_03950 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 LandPlants
Gb_04812 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 LandPlants
Gb_04911 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 LandPlants
Gb_05692 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 LandPlants
Gb_06720 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 LandPlants
Gb_06760 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_08424 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_10193 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 LandPlants
Gb_13694 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 LandPlants
Gb_15469 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_16634 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 LandPlants
Gb_19120 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.13 LandPlants
Gb_20651 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_21218 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_21357 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 LandPlants
Gb_25155 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 LandPlants
Gb_25845 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 LandPlants
Gb_25861 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_26007 No alias no hits & (original description: none) 0.08 LandPlants
Gb_26797 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.14 LandPlants
Gb_29132 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Gb_29642 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 LandPlants
Gb_30626 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 LandPlants
Gb_31730 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 LandPlants
Gb_31767 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 LandPlants
Gb_32699 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 LandPlants
Gb_32952 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 LandPlants
Gb_33153 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_33272 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 LandPlants
Gb_34479 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_34971 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_36489 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 LandPlants
Gb_36638 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_36670 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 LandPlants
Gb_39390 No alias no hits & (original description: none) 0.05 LandPlants
Gb_39693 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 LandPlants
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_39849 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 LandPlants
Gb_40169 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 LandPlants
Gb_40420 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Gb_41711 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_00340 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_00583 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 SeedPlants
Gb_02905 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_03950 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 SeedPlants
Gb_04812 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 SeedPlants
Gb_04911 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.11 SeedPlants
Gb_05692 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 SeedPlants
Gb_06376 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_06720 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 SeedPlants
Gb_06723 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 SeedPlants
Gb_08424 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_08526 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 SeedPlants
Gb_10009 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants
Gb_10193 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 SeedPlants
Gb_11892 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_13694 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 SeedPlants
Gb_15469 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_16634 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 SeedPlants
Gb_17161 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.13 SeedPlants
Gb_18989 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 SeedPlants
Gb_19120 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.16 SeedPlants
Gb_20651 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 SeedPlants
Gb_21357 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 SeedPlants
Gb_23276 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_23452 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 SeedPlants
Gb_23854 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 SeedPlants
Gb_25155 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 SeedPlants
Gb_26007 No alias no hits & (original description: none) 0.08 SeedPlants
Gb_26797 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.16 SeedPlants
Gb_29642 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 SeedPlants
Gb_30626 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 SeedPlants
Gb_31730 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 SeedPlants
Gb_32814 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_32952 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 SeedPlants
Gb_33272 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 SeedPlants
Gb_34810 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_34971 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_36638 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_36670 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 SeedPlants
Gb_39390 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 SeedPlants
Gb_39849 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 SeedPlants
Gb_40169 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 SeedPlants
Gb_40420 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_41307 No alias no hits & (original description: none) 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013103 RVT_2 62 134
No external refs found!