Gb_28387


Description : pectin methylesterase


Gene families : OG_01_0000046 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000046_tree ,
OG_02_0000020 (LandPlants) Phylogenetic Tree(s): OG_02_0000020_tree ,
OG_03_0000014 (SeedPlants) Phylogenetic Tree(s): OG_03_0000014_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28387
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
AMTR_s00010p00161740 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00033p00227850 evm_27.TU.AmTr_v1... Probable pectinesterase/pectinesterase inhibitor 21... 0.03 Archaeplastida
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00129p00033080 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00129p00070300 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT1G02810 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT1G11580 ATPMEPCRA, PMEPCRA methylesterase PCR A 0.04 Archaeplastida
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.04 Archaeplastida
AT1G53840 PME1, ATPME1 pectin methylesterase 1 0.02 Archaeplastida
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT2G47550 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT3G59010 PME61 pectin methylesterase 61 0.03 Archaeplastida
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.03 Archaeplastida
GSVIVT01018620001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.07 Archaeplastida
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01027653001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028265001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01031165001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01035108001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.07 Archaeplastida
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_05254 No alias pectin methylesterase 0.05 Archaeplastida
Gb_06354 No alias pectin methylesterase 0.04 Archaeplastida
Gb_18512 No alias pectin methylesterase 0.06 Archaeplastida
Gb_21388 No alias pectin methylesterase 0.04 Archaeplastida
Gb_24564 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os01g13320.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g15039.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g21034.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g65790.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os02g18650.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os03g18860.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os04g38560.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os05g29790.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os06g09340.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g07090.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os11g08750.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g36240.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_10372207g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_10434624g0020 No alias pectin methylesterase 0.03 Archaeplastida
MA_10434786g0010 No alias No annotation 0.03 Archaeplastida
MA_133919g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_158002g0020 No alias pectin methylesterase 0.03 Archaeplastida
MA_2017g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_354248g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_648837g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_86577g0010 No alias pectin methylesterase 0.05 Archaeplastida
Mp8g00060.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp8g09330.1 No alias pectin methylesterase 0.04 Archaeplastida
Pp3c15_12280V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.02 Archaeplastida
Pp3c18_22120V3.1 No alias pectin methylesterase PCR fragment F 0.04 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c26_2170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c4_22420V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Smo83744 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Smo89509 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc01g099960.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc02g014300.2.1 No alias pectin methylesterase 0.07 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g080220.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc02g081990.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083360.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083840.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083870.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc03g123620.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc06g034360.2.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc09g075350.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e011069_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e017514_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e019069_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e025576_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.07 Archaeplastida
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 LandPlants
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00010p00161740 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
AMTR_s00129p00070300 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AT1G02810 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT1G11580 ATPMEPCRA, PMEPCRA methylesterase PCR A 0.03 LandPlants
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT2G47550 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT3G59010 PME61 pectin methylesterase 61 0.02 LandPlants
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT5G20860 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
GSVIVT01015000001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01018620001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 LandPlants
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01027653001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 LandPlants
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
Gb_05254 No alias pectin methylesterase 0.05 LandPlants
LOC_Os01g15039.1 No alias pectin methylesterase 0.02 LandPlants
LOC_Os02g54190.1 No alias pectin methylesterase 0.04 LandPlants
LOC_Os05g29790.1 No alias pectin methylesterase 0.02 LandPlants
LOC_Os11g36240.1 No alias pectin methylesterase 0.02 LandPlants
MA_10372207g0010 No alias pectin methylesterase 0.03 LandPlants
MA_10434786g0010 No alias No annotation 0.02 LandPlants
MA_133919g0010 No alias pectin methylesterase 0.03 LandPlants
MA_158002g0020 No alias pectin methylesterase 0.02 LandPlants
MA_648837g0010 No alias pectin methylesterase 0.02 LandPlants
MA_96515g0010 No alias pectin methylesterase 0.02 LandPlants
Mp8g09330.1 No alias pectin methylesterase 0.03 LandPlants
Pp3c2_35260V3.1 No alias pectin methylesterase 3 0.02 LandPlants
Solyc01g091050.4.1 No alias pectin methylesterase 0.02 LandPlants
Solyc01g099960.4.1 No alias pectin methylesterase 0.02 LandPlants
Solyc02g014300.2.1 No alias pectin methylesterase 0.05 LandPlants
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.04 LandPlants
Solyc02g080220.3.1 No alias pectin methylesterase 0.04 LandPlants
Solyc03g083870.4.1 No alias pectin methylesterase 0.04 LandPlants
Solyc06g034360.2.1 No alias pectin methylesterase 0.02 LandPlants
Solyc07g064190.3.1 No alias pectin methylesterase 0.02 LandPlants
Zm00001e011069_P001 No alias pectin methylesterase 0.02 LandPlants
Zm00001e017514_P001 No alias pectin methylesterase 0.03 LandPlants
Zm00001e025576_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e026790_P001 No alias pectin methylesterase 0.05 LandPlants
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 SeedPlants
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
AMTR_s00010p00161740 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
AT1G11580 ATPMEPCRA, PMEPCRA methylesterase PCR A 0.02 SeedPlants
AT3G59010 PME61 pectin methylesterase 61 0.02 SeedPlants
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 SeedPlants
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 SeedPlants
LOC_Os01g15039.1 No alias pectin methylesterase 0.02 SeedPlants
LOC_Os02g54190.1 No alias pectin methylesterase 0.04 SeedPlants
MA_436039g0010 No alias pectin methylesterase 0.02 SeedPlants
MA_648837g0010 No alias pectin methylesterase 0.02 SeedPlants
MA_8928694g0010 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.02 SeedPlants
Solyc02g014300.2.1 No alias pectin methylesterase 0.02 SeedPlants
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.03 SeedPlants
Solyc02g080220.3.1 No alias pectin methylesterase 0.02 SeedPlants
Solyc03g083870.4.1 No alias pectin methylesterase 0.02 SeedPlants
Zm00001e011069_P001 No alias pectin methylesterase 0.02 SeedPlants
Zm00001e025576_P001 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 75 230
IPR000070 Pectinesterase_cat 300 597
No external refs found!