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  5. Pnu_g19634

Pnu_g19634


Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19634
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT1G49450 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g023030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g042459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g22068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05740.t1 Aspi01Gene05740 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05743.t1 Aspi01Gene05743 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05748.t1 Aspi01Gene05748 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11108.t1 Aspi01Gene11108 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23387.t1 Aspi01Gene23387 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23389.t2 Aspi01Gene23389 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44873.t1 Aspi01Gene44873 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44877.t1 Aspi01Gene44877 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68892.t1 Aspi01Gene68892 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68894.t1 Aspi01Gene68894 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010472 No alias not classified & original description: CDS=1-1746 0.04 OrthoFinder output from all 47 species
Cba_g09340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G066900.1 Ceric.05G066900 not classified & original description: pacid=50578771... 0.03 OrthoFinder output from all 47 species
Ceric.12G075900.1 Ceric.12G075900 not classified & original description: pacid=50601390... 0.06 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.04 OrthoFinder output from all 47 species
Dac_g07418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007589001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01007825001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035639001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_27340 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g13140.1 LOC_Os06g13140 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g40260.1 LOC_Os12g40260 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g43759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25659 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015595 No alias not classified & original description: CDS=1-1779 0.02 OrthoFinder output from all 47 species
Solyc03g111780.1.1 Solyc03g111780 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g113850.1.1 Solyc03g113850 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g005020.3.1 Solyc04g005020 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g006340.3.1 Solyc05g006340 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g13772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007790_P001 Zm00001e007790 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e015781_P001 Zm00001e015781 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041085_P001 Zm00001e041085 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 240 274
IPR001680 WD40_repeat 333 364
IPR001680 WD40_repeat 285 320
IPR001680 WD40_repeat 374 413
No external refs found!