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  5. Pnu_g19440

Pnu_g19440


Description : regulatory mediator of IRE1-bZIP60 UPR pathway & original description: none


Gene families : OG0000429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19440

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g02690.1 LOC_Os07g02690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g02850.1 LOC_Os07g02850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g02880.1 LOC_Os07g02880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g02900.1 LOC_Os07g02900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g02920.1 LOC_Os07g02920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g02940.1 LOC_Os07g02940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g38210.1 LOC_Os11g38210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g38220.1 LOC_Os11g38220 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g38240.1 SVB, LOC_Os11g38240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR007493 DUF538 29 140
No external refs found!