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  5. Pnu_g19393

Pnu_g19393


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19393

Target Alias Description ECC score Gene Family Method Actions
Aev_g43886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53152.t1 Aspi01Gene53152 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10246 No alias PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g17560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 OrthoFinder output from all 47 species
Ppi_g08484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g071550.3.1 Solyc03g071550 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g065340.3.1 Solyc09g065340 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g04858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 744 794
No external refs found!