Pnu_g19388


Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19388

Target Alias Description ECC score Gene Family Method Actions
AT3G12920 No alias SBP (S-ribonuclease binding protein) family protein 0.05 OrthoFinder output from all 47 species
Adi_g018160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08224 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g56929 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30240.t1 SBP1, Aspi01Gene30240 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62396.t1 SBP1, Aspi01Gene62396 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0299.g063636 No alias not classified & original description: CDS=599-2044 0.03 OrthoFinder output from all 47 species
Dac_g02764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00854 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001126001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_07205 SBP1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g46570.1 LOC_Os03g46570 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 OrthoFinder output from all 47 species
LOC_Os04g32980.1 LOC_Os04g32980 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g41580.1 LOC_Os10g41580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g34080.1 LOC_Os11g34080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g16938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_20197g0010 SBP1 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 OrthoFinder output from all 47 species
Nbi_g00907 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007211 SBP1 not classified & original description: CDS=385-1452 0.03 OrthoFinder output from all 47 species
Solyc08g007120.3.1 Solyc08g007120 Probable BOI-related E3 ubiquitin-protein ligase 2... 0.03 OrthoFinder output from all 47 species
Spa_g50942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008274_P001 Zm00001e008274 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e012302_P001 Zm00001e012302 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 OrthoFinder output from all 47 species
Zm00001e014678_P001 Zm00001e014678 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e024196_P001 RING, Zm00001e024196 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024199_P001 Zm00001e024199 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040813_P001 Zm00001e040813 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!