Pnu_g19359
Description : not classified & original description: none
Gene families : OG0000227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000227_tree
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g19359 | |
| Cluster | HCCA: Cluster_69 |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00041p00168770 | evm_27.TU.AmTr_v1... | Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00064p00089690 | J20,... | Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT2G17880 | No alias | Chaperone DnaJ-domain superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G36040 | No alias | Chaperone DnaJ-domain superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g01968 | J20 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g09684 | J20 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g00729 | J20 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07977 | TPR16 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g25607 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene61814.t1 | Aspi01Gene61814 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene61816.t1 | Aspi01Gene61816 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene61820.t1 | Aspi01Gene61820 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene61821.t1 | Aspi01Gene61821 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0024.g020416 | No alias | not classified & original description: CDS=52-738 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.20G067600.1 | Ceric.20G067600 | not classified & original description: pacid=50566614... | 0.03 | OrthoFinder output from all 47 species | |
| Cre07.g346600 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g20831 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g28384 | J20 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g22715 | J20 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_02868 | No alias | Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_04901 | No alias | Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_09162 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_36084 | No alias | Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10427494g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_276247g0010 | No alias | Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_281725g0010 | J20 | Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| MA_3759749g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g48501 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g31687 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g062160.1.1 | Solyc02g062160 | Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g092260.4.1 | J20, Solyc09g092260 | Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g10254 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g26345 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g39332 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
No InterPro domains available for this sequence
External Links
| No external refs found! |