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  5. Gb_28036

Gb_28036


Description : Expansin-A29 OS=Oryza sativa subsp. japonica (sp|q4pr39|exp29_orysj : 240.0)


Gene families : OG_01_0000024 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000024_tree ,
OG_02_0063952 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0057469 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28036
Cluster HCCA: Cluster_356

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00101270 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.02 Archaeplastida
AT5G39270 EXPA22, ATEXP22,... expansin A22 0.04 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.04 Archaeplastida
Cre16.g686700 No alias Expansin-A24 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Gb_01504 No alias alpha-class expansin 0.08 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06040.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10425823g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10433559g0020 No alias alpha-class expansin 0.03 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_35592g0020 No alias alpha-class expansin 0.04 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.04 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_792493g0010 No alias alpha-class expansin 0.03 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.04 Archaeplastida
Solyc02g081210.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc09g010860.4.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e003888_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e003889_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 69 152
IPR007117 Expansin_CBD 148 205
No external refs found!