MA_80232g0010


Description : 33.99 development.unspecified Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2. CUP-SHAPED COTYLEDON 2 (CUC2)


Gene families : OG_01_0000027 (Gene family) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_80232g0010
Cluster HCCA cluster: Cluster_319

Target Alias Description ECC score Gene Family Method Actions
AT1G33280 BRN1, ANAC015, NAC015 NAC domain containing protein 15 0.02 Gene family
AT1G79580 SMB, ANAC033 NAC (No Apical Meristem) domain transcriptional... 0.02 Gene family
AT3G18400 anac058, NAC058 NAC domain containing protein 58 0.02 Gene family
AT4G10350 ANAC070, BRN2, NAC070 NAC domain containing protein 70 0.02 Gene family
AT4G17980 anac071, NAC071 NAC domain containing protein 71 0.02 Gene family
AT5G46590 anac096, NAC096 NAC domain containing protein 96 0.02 Gene family
GSVIVT01007982001 No alias 33.99 development.unspecified NAC domain containing... 0.02 Gene family
GSVIVT01008291001 No alias 33.99 development.unspecified NAC domain containing... 0.02 Gene family
GSVIVT01027431001 No alias 33.99 development.unspecified NAC transcription factor... 0.02 Gene family
GSVIVT01033374001 No alias 33.99 development.unspecified Arabidopsis NAC domain... 0.02 Gene family
GSVIVT01035554001 No alias 33.99 development.unspecified Arabidopsis NAC domain... 0.02 Gene family
Solyc06g063430.2.1 Solyc06g063430.2 33.99 development.unspecified NAC domain protein. SMB,... 0.02 Gene family
Solyc12g017400.2.1 Solyc12g017400.2 33.99 development.unspecified NAC-domain protein.... 0.02 Gene family
Zm00001d013717 No alias 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Zm00001d021424 No alias 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Zm00001d025483 GRMZM2G435824 33.99 development.unspecified NAC domain protein. SMB,... 0.02 Gene family
Zm00001d033308 No alias 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Zm00001d052390 No alias 33.99 development.unspecified Arabidopsis NAC domain... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003441 NAC-dom 16 142
No external refs found!