Pnu_g19196 (WRKY6, ATWRKY6)

Aliases : WRKY6, ATWRKY6

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g19196
Cluster	HCCA: Cluster_84

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00243090	WRKY49,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00015p00228580	WRKY53,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
AMTR_s00058p00090300	WRKY4,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT3G62340	WRKY68, AtWRKY68	WRKY family transcription factor	0.04	OrthoFinder output from all 47 species
AT4G22070	WRKY31, ATWRKY31	WRKY DNA-binding protein 31	0.05	OrthoFinder output from all 47 species
Adi_g031754	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g075760	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g112197	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g15438	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g46712	WRKY4	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g20332	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20941	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g22969	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g10884	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g25752	WRKY67, ATWRKY67	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene17672.t1	WRKY28,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0019.g015016	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Azfi_s0030.g024252	No alias	WRKY-type transcription factor & original description: CDS=1-981	0.08	OrthoFinder output from all 47 species
Azfi_s0065.g035963	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: CDS=1-801	0.04	OrthoFinder output from all 47 species
Azfi_s0245.g059987	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: CDS=1-2319	0.02	OrthoFinder output from all 47 species
Ceric.01G101400.1	WRKY4, Ceric.01G101400	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g09789	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g26985	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g08194	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g30999	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01015952001	ATWRKY40, WRKY40	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01019511001	WRKY53, ATWRKY53	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01027069001	WRKY53, ATWRKY53	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01034968001	WRKY48, ATWRKY48	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_01873	ATWRKY71, WRKY71	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Gb_08731	ATWRKY57, WRKY57	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os01g43650.1	WRKY28,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g60540.1	WRKY62,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g04640.1	WRKY42,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g40080.1	WRKY54,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g16970	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_10434651g0010	WRKY4	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_212937g0010	WRKY6, ATWRKY6	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Msp_g15358	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g19708	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g14900	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g13055	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g40441	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Pnu_g22356	ATWRKY57, WRKY57	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g08423	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g63321	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002796	WRKY4	WRKY-type transcription factor & original description: CDS=1-1740	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006969	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g50657	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g067430.3.1	WRKY72,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc03g113120.4.1	WRKY72,...	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
Solyc06g070990.3.1	WRKY61,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g15879	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g22896	ABO3, WRKY63, ATWRKY63	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g12018	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e010048_P001	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e020229_P002	ATWRKY71,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027989_P001	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	416	473

External Links

No external refs found!

Pnu_g19196 (WRKY6, ATWRKY6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation