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  5. Pnu_g19187

Pnu_g19187


Description : not classified & original description: none


Gene families : OG0002416 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002416_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00254020 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g007692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007693 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g03628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03874 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.19G035500.1 Ceric.19G035500 not classified & original description: pacid=50575844... 0.03 OrthoFinder output from all 47 species
Gb_00884 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g38730.1 LOC_Os03g38730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g30883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004901_P001 Zm00001e004901 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012491_P002 Zm00001e012491 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007248 Mpv17_PMP22 324 385
No external refs found!