Gb_27819


Description : transcription factor (KNOX). transcription factor (NAC)


Gene families : OG_01_0000008 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000038 (LandPlants) Phylogenetic Tree(s): OG_02_0000038_tree ,
OG_03_0001766 (SeedPlants) Phylogenetic Tree(s): OG_03_0001766_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27819

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00193150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
AMTR_s00003p00252470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.01 Archaeplastida
AMTR_s00018p00070180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.01 Archaeplastida
AMTR_s00025p00174590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
AMTR_s00079p00099620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00092p00142980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
AMTR_s00113p00077540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
AMTR_s00119p00045570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.01 Archaeplastida
AT1G12260 EMB2749,... NAC 007 0.01 Archaeplastida
AT1G32510 NAC011, ANAC011 NAC domain containing protein 11 0.01 Archaeplastida
AT1G32770 ANAC012, NST3,... NAC domain containing protein 12 0.01 Archaeplastida
AT1G33280 BRN1, ANAC015, NAC015 NAC domain containing protein 15 0.01 Archaeplastida
AT1G52890 ANAC019, NAC019 NAC domain containing protein 19 0.01 Archaeplastida
AT1G56010 anac021, NAC1, ANAC022 NAC domain containing protein 1 0.02 Archaeplastida
AT1G61110 NAC025, anac025 NAC domain containing protein 25 0.02 Archaeplastida
AT1G62700 VND5, ANAC026 Arabidopsis NAC domain containing protein 26 0.01 Archaeplastida
AT1G65910 anac028, NAC028 NAC domain containing protein 28 0.03 Archaeplastida
AT1G71930 ANAC030, VND7 vascular related NAC-domain protein 7 0.01 Archaeplastida
AT1G76420 ANAC031, NAC368, CUC3 NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
AT1G79580 SMB, ANAC033 NAC (No Apical Meristem) domain transcriptional... 0.01 Archaeplastida
AT2G24430 ANAC039, NAC038, ANAC038 NAC domain containing protein 38 0.02 Archaeplastida
AT2G43000 NAC042, anac042 NAC domain containing protein 42 0.02 Archaeplastida
AT2G46770 NST1, ANAC043, EMB2301 NAC (No Apical Meristem) domain transcriptional... 0.01 Archaeplastida
AT3G04070 anac047, NAC047 NAC domain containing protein 47 0.01 Archaeplastida
AT3G10480 ANAC050, NAC050 NAC domain containing protein 50 0.07 Archaeplastida
AT3G12977 No alias NAC (No Apical Meristem) domain transcriptional... 0.01 Archaeplastida
AT3G15170 ANAC054, ATNAC1, CUC1 NAC (No Apical Meristem) domain transcriptional... 0.05 Archaeplastida
AT3G18400 anac058, NAC058 NAC domain containing protein 58 0.01 Archaeplastida
AT3G29035 ATNAC3, NAC3, ANAC059 NAC domain containing protein 3 0.02 Archaeplastida
AT3G61910 NST2, NAC066, ANAC066 NAC domain protein 66 0.02 Archaeplastida
AT4G17980 anac071, NAC071 NAC domain containing protein 71 0.01 Archaeplastida
AT4G27410 RD26, ANAC072 NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
AT4G28530 anac074, NAC074 NAC domain containing protein 74 0.01 Archaeplastida
AT4G36160 VND2, NAC076, ANAC076 NAC domain containing protein 76 0.01 Archaeplastida
AT5G04400 NAC077, anac077 NAC domain containing protein 77 0.02 Archaeplastida
AT5G13180 VNI2, NAC083, ANAC083 NAC domain containing protein 83 0.02 Archaeplastida
AT5G24590 ANAC091, TIP No description available 0.02 Archaeplastida
AT5G39610 NAC2, ORE1,... NAC domain containing protein 6 0.02 Archaeplastida
AT5G39820 NAC094, anac094 NAC domain containing protein 94 0.02 Archaeplastida
AT5G46590 anac096, NAC096 NAC domain containing protein 96 0.01 Archaeplastida
AT5G53950 ATCUC2, ANAC098, CUC2 NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
AT5G64060 anac103, NAC103 NAC domain containing protein 103 0.01 Archaeplastida
GSVIVT01001264001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01008291001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01013419001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01014287001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
GSVIVT01014405001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01016176001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01018623001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01018809001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.01 Archaeplastida
GSVIVT01019670001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01022354001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01027431001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.01 Archaeplastida
GSVIVT01029392001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01033374001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
GSVIVT01035554001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
Gb_01126 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_01375 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_05670 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_13930 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_13957 No alias transcription factor (NAC) 0.04 Archaeplastida
Gb_35048 No alias transcription factor (NAC) 0.01 Archaeplastida
Gb_35309 No alias transcription factor (NAC) 0.04 Archaeplastida
Gb_41540 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os01g01470.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os01g29840.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os01g66120.1 No alias transcription factor (NAC) 0.01 Archaeplastida
LOC_Os02g41450.1 No alias transcription factor (NAC) 0.05 Archaeplastida
LOC_Os02g56600.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os03g21030.1 No alias transcription factor (NAC) 0.01 Archaeplastida
LOC_Os03g42630.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os03g60080.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os04g38720.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os04g43560.1 No alias transcription factor (NAC) 0.08 Archaeplastida
LOC_Os05g34310.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os05g34600.1 No alias transcription factor (NAC) 0.01 Archaeplastida
LOC_Os05g34830.1 No alias transcription factor (NAC) 0.01 Archaeplastida
LOC_Os06g04090.1 No alias transcription factor (NAC) 0.07 Archaeplastida
LOC_Os07g48450.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os08g02300.1 No alias transcription factor (NAC) 0.01 Archaeplastida
MA_103386g0010 No alias transcription factor (NAC) 0.01 Archaeplastida
MA_109677g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_112054g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_137415g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_138461g0010 No alias transcription factor (NAC) 0.01 Archaeplastida
MA_139896g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_21732g0010 No alias transcription factor (NAC) 0.01 Archaeplastida
MA_23113g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_33912g0010 No alias transcription factor (NAC) 0.01 Archaeplastida
MA_40991g0010 No alias transcription factor (NAC) 0.01 Archaeplastida
MA_5115g0010 No alias transcription factor (NAC) 0.01 Archaeplastida
MA_86256g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_95225g0010 No alias transcription factor (NAC) 0.01 Archaeplastida
Mp6g02670.1 No alias transcription factor (NAC) 0.01 Archaeplastida
Pp3c13_10800V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.01 Archaeplastida
Pp3c3_25610V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
Pp3c3_8880V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
Pp3c5_570V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
Pp3c5_630V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.01 Archaeplastida
Solyc02g084350.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc02g088180.3.1 No alias transcription factor (NAC) 0.08 Archaeplastida
Solyc03g083880.4.1 No alias transcription factor (NAC) 0.08 Archaeplastida
Solyc04g005610.3.1 No alias transcription factor (NAC) 0.01 Archaeplastida
Solyc07g062840.3.1 No alias transcription factor (NAC) 0.01 Archaeplastida
Solyc07g066330.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc08g006020.4.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc08g008660.4.1 No alias transcription factor (NAC) 0.01 Archaeplastida
Solyc10g055760.2.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc11g018660.2.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc12g036480.2.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e000149_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e001536_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e001540_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e003559_P003 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e005094_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e007411_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e007905_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e010094_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e011786_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e012429_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e012982_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e019017_P002 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e019046_P002 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e021857_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e022155_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e023108_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e029116_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e029188_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e029194_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e029913_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e031694_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e031703_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e034574_P001 No alias transcription factor (NAC) 0.01 Archaeplastida
Zm00001e035277_P002 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e036590_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e039246_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e041236_P002 No alias transcription factor (NAC) 0.1 Archaeplastida
AMTR_s00001p00193150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 LandPlants
AMTR_s00003p00252470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.01 LandPlants
AT1G52890 ANAC019, NAC019 NAC domain containing protein 19 0.01 LandPlants
AT2G43000 NAC042, anac042 NAC domain containing protein 42 0.02 LandPlants
AT3G04070 anac047, NAC047 NAC domain containing protein 47 0.01 LandPlants
AT4G27410 RD26, ANAC072 NAC (No Apical Meristem) domain transcriptional... 0.02 LandPlants
AT5G13180 VNI2, NAC083, ANAC083 NAC domain containing protein 83 0.02 LandPlants
AT5G39820 NAC094, anac094 NAC domain containing protein 94 0.02 LandPlants
GSVIVT01022354001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 LandPlants
Gb_35309 No alias transcription factor (NAC) 0.03 LandPlants
Gb_41540 No alias transcription factor (NAC) 0.02 LandPlants
LOC_Os01g66120.1 No alias transcription factor (NAC) 0.01 LandPlants
LOC_Os03g60080.1 No alias transcription factor (NAC) 0.02 LandPlants
LOC_Os05g34310.1 No alias transcription factor (NAC) 0.01 LandPlants
LOC_Os05g34600.1 No alias transcription factor (NAC) 0.01 LandPlants
LOC_Os05g34830.1 No alias transcription factor (NAC) 0.01 LandPlants
LOC_Os07g48450.1 No alias transcription factor (NAC) 0.02 LandPlants
MA_103386g0010 No alias transcription factor (NAC) 0.01 LandPlants
MA_112054g0010 No alias transcription factor (NAC) 0.01 LandPlants
MA_137415g0010 No alias transcription factor (NAC) 0.04 LandPlants
MA_139896g0010 No alias transcription factor (NAC) 0.04 LandPlants
MA_5115g0010 No alias transcription factor (NAC) 0.01 LandPlants
MA_86256g0010 No alias transcription factor (NAC) 0.01 LandPlants
MA_95225g0010 No alias transcription factor (NAC) 0.01 LandPlants
Pp3c13_10800V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.01 LandPlants
Pp3c3_8880V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 LandPlants
Pp3c5_630V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.01 LandPlants
Solyc04g005610.3.1 No alias transcription factor (NAC) 0.01 LandPlants
Zm00001e001540_P001 No alias transcription factor (NAC) 0.03 LandPlants
Zm00001e011786_P001 No alias transcription factor (NAC) 0.02 LandPlants
Zm00001e019017_P002 No alias transcription factor (NAC) 0.02 LandPlants
Zm00001e019046_P002 No alias transcription factor (NAC) 0.02 LandPlants
Zm00001e021857_P001 No alias transcription factor (NAC) 0.05 LandPlants
Zm00001e029188_P001 No alias transcription factor (NAC) 0.05 LandPlants
Zm00001e031694_P001 No alias No annotation 0.03 LandPlants
Zm00001e031703_P001 No alias transcription factor (NAC) 0.02 LandPlants
Zm00001e035277_P002 No alias transcription factor (NAC) 0.02 LandPlants
Zm00001e039246_P001 No alias transcription factor (NAC) 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003441 NAC-dom 100 224
IPR008422 Homeobox_KN_domain 723 759
IPR005541 KNOX2 584 627
No external refs found!