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  5. Pnu_g18978

Pnu_g18978


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18978
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Adi_g034600 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 39 species
Adi_g036223 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Adi_g073195 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Aob_g37405 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Aop_g23925 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Aop_g35654 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Dac_g25185 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Dac_g38555 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Dac_g40570 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Dcu_g21356 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Dcu_g23370 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Dcu_g27802 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Dcu_g49874 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Dde_g42142 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Len_g52443 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Msp_g35434 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Nbi_g32315 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 39 species
Nbi_g32539 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Nbi_g35705 No alias UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Pir_g60149 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Pnu_g14928 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Pnu_g16075 No alias UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Ppi_g06615 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Ppi_g53441 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Spa_g33514 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Spa_g36429 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Spa_g36443 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Tin_g35440 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Tin_g42623 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.04 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000255 allantoin metabolic process IEP HCCA
BP GO:0000256 allantoin catabolic process IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004037 allantoicase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043605 amide catabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!