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  5. Pnu_g18881

Pnu_g18881 (RPH1)


Aliases : RPH1

Description : not classified & original description: none


Gene families : OG0006050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18881

Target Alias Description ECC score Gene Family Method Actions
AT2G48070 RPH1 resistance to phytophthora 1 0.05 OrthoFinder output from all 47 species
Adi_g077594 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24131 RPH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g11899 RPH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g22056 RPH1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g08928 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33714.t1 RPH1, Aspi01Gene33714 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0268.g061074 RPH1 not classified & original description: CDS=29-781 0.05 OrthoFinder output from all 47 species
Cba_g01711 RPH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001374.9 RPH1 No description available 0.01 OrthoFinder output from all 47 species
Cre03.g145207 RPH1 No description available 0.07 OrthoFinder output from all 47 species
Dac_g24608 RPH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11977 RPH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g38855 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06539 RPH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01011060001 RPH1 No description available 0.05 OrthoFinder output from all 47 species
LOC_Os05g33520.1 RPH1, LOC_Os05g33520 no description available(sp|m1c5m7|rph1_soltu : 245.0) 0.04 OrthoFinder output from all 47 species
Len_g11954 RPH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g00620 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_122925g0010 RPH1 no description available(sp|q9zu82|rph1_arath : 127.0) 0.02 OrthoFinder output from all 47 species
Ore_g14460 RPH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15587 RPH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo165828 RPH1 No description available 0.02 OrthoFinder output from all 47 species
Solyc05g055850.3.1 RPH1, Solyc05g055850 no description available(sp|m1c5m7|rph1_soltu : 397.0) 0.03 OrthoFinder output from all 47 species
Spa_g11278 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19889 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031640_P002 RPH1, Zm00001e031640 no description available(sp|m1c5m7|rph1_soltu : 241.0) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!