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  5. Pnu_g18880

Pnu_g18880


Description : not classified & original description: none


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18880

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00176760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00122690 evm_27.TU.AmTr_v1... Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Aev_g40517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39496 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g18969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34673.t1 Aspi01Gene34673 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.27G060800.1 Ceric.27G060800 not classified & original description: pacid=50605763... 0.04 OrthoFinder output from all 47 species
Ceric.37G005000.1 Ceric.37G005000 not classified & original description: pacid=50616787... 0.02 OrthoFinder output from all 47 species
Ceric.37G005100.1 Ceric.37G005100 not classified & original description: pacid=50616791... 0.02 OrthoFinder output from all 47 species
Ceric.37G005200.1 Ceric.37G005200 not classified & original description: pacid=50615572... 0.02 OrthoFinder output from all 47 species
LOC_Os01g50440.1 LOC_Os01g50440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g19919 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g37428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g04500.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Ppi_g06734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g071310.3.1 Solyc02g071310 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Spa_g02439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009712 catechol-containing compound metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0018576 catechol 1,2-dioxygenase activity IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
MF GO:0019114 catechol dioxygenase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 15 142
No external refs found!