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  5. Pnu_g18597

Pnu_g18597 (ATTRX4, ATH4)


Aliases : ATTRX4, ATH4

Description : H-type thioredoxin *(Trx-H) & original description: none


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18597
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Adi_g089866 ATHM4, TRX-M4, ATM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g121524 ATH5, ATTRX5, TRX5, LIV1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g25486 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40869 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g43053 ATHM4, TRX-M4, ATM4 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g45754 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g38375 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g39752 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g47757 ATHM4, TRX-M4, ATM4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g52013 TRXH2, TRX2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g65877 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40946 ATTRX4, ATH4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g46067 TRXH2, TRX2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g27634 ATTRX4, ATH4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37991 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39613 ATTRX1, ATTRX H1, TRX1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g43550 ATHM2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g54426 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g33302 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000255 allantoin metabolic process IEP HCCA
BP GO:0000256 allantoin catabolic process IEP HCCA
MF GO:0004037 allantoicase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP HCCA
BP GO:0043605 amide catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 9 99
No external refs found!