Gb_27225


Description : pectin methylesterase


Gene families : OG_01_0000078 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000078_tree ,
OG_02_0000108 (LandPlants) Phylogenetic Tree(s): OG_02_0000108_tree ,
OG_03_0007936 (SeedPlants) Phylogenetic Tree(s): OG_03_0007936_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27225
Cluster HCCA: Cluster_339

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT1G05310 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT3G29090 PME31, ATPME31 pectin methylesterase 31 0.02 Archaeplastida
AT5G47500 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
GSVIVT01013832001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
GSVIVT01023786001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01034985001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_01460 No alias pectin methylesterase 0.03 Archaeplastida
Gb_17798 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os05g44600.1 No alias pectin methylesterase 0.02 Archaeplastida
MA_19196g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_20853g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_304854g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_66089g0010 No alias pectin methylesterase 0.04 Archaeplastida
Mp2g01420.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp2g19430.1 No alias pectin methylesterase 0.08 Archaeplastida
Mp3g01170.1 No alias pectin methylesterase 0.03 Archaeplastida
Mp5g03920.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp5g03930.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c10_18650V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c10_20120V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c12_23790V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c12_24000V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c18_13190V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c1_6010V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c25_760V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_30560V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c3_35217V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c5_23400V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c8_2010V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Solyc04g080530.3.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc08g078640.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g091730.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc10g083820.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027944_P002 No alias pectin methylesterase 0.02 Archaeplastida
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00116p00025230 evm_27.TU.AmTr_v1... Probable pectinesterase 8 OS=Arabidopsis thaliana 0.03 LandPlants
AT5G47500 No alias Pectin lyase-like superfamily protein 0.03 LandPlants
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 LandPlants
Gb_17798 No alias pectin methylesterase 0.05 LandPlants
LOC_Os05g44600.1 No alias pectin methylesterase 0.02 LandPlants
MA_20853g0010 No alias pectin methylesterase 0.03 LandPlants
MA_66089g0010 No alias pectin methylesterase 0.02 LandPlants
Mp2g19430.1 No alias pectin methylesterase 0.03 LandPlants
Mp3g01170.1 No alias pectin methylesterase 0.02 LandPlants
Pp3c12_24000V3.1 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
Pp3c18_13190V3.1 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
Solyc04g080530.3.1 No alias pectin methylesterase 0.03 LandPlants
Solyc08g078640.3.1 No alias no hits & (original description: none) 0.04 LandPlants
Solyc10g083820.2.1 No alias no hits & (original description: none) 0.02 LandPlants
AT5G47500 No alias Pectin lyase-like superfamily protein 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 56 348
No external refs found!