1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g18509

Pnu_g18509


Description : not classified & original description: none


Gene families : OG0002239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002239_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18509
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00081520 evm_27.TU.AmTr_v1... Calmodulin binding protein PICBP OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ala_g18861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G064100.1 Ceric.05G064100 not classified & original description: pacid=50578494... 0.04 OrthoFinder output from all 47 species
Dcu_g09706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_23198 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g26271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428360g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g48932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR012417 CaM-bd_dom_pln 711 785
No external refs found!