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  5. Pnu_g18286

Pnu_g18286


Description : histone demethylase *(JMJD6) & original description: none


Gene families : OG0001583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001583_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18286
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cba_g66219 No alias histone demethylase *(JMJD6) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12488 No alias histone demethylase *(JMJD6) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432215g0010 No alias histone demethylase (JMJD6). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016470 No alias histone demethylase *(JMJD6) & original description: CDS=5-1432 0.03 OrthoFinder output from all 47 species
Sam_g15658 No alias histone demethylase *(JMJD6) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004474 malate synthase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
InterPro domains Description Start Stop
IPR041667 Cupin_8 140 361
IPR001810 F-box_dom 19 59
No external refs found!