AMTR_s00044p00163060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.176

Description : Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana


Gene families : OG_01_0008811 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008811_tree ,
OG_02_0008840 (LandPlants) Phylogenetic Tree(s): OG_02_0008840_tree ,
OG_03_0010638 (SeedPlants) Phylogenetic Tree(s): OG_03_0010638_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00163060
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g02590.1 No alias Pentatricopeptide repeat-containing protein At2g01860... 0.03 Archaeplastida
MA_10281691g0010 No alias Pentatricopeptide repeat-containing protein At2g01860... 0.04 Archaeplastida
Gb_19411 No alias Pentatricopeptide repeat-containing protein At2g01860... 0.02 LandPlants
LOC_Os02g02590.1 No alias Pentatricopeptide repeat-containing protein At2g01860... 0.03 LandPlants
MA_10281691g0010 No alias Pentatricopeptide repeat-containing protein At2g01860... 0.04 LandPlants
LOC_Os02g02590.1 No alias Pentatricopeptide repeat-containing protein At2g01860... 0.03 SeedPlants
MA_10281691g0010 No alias Pentatricopeptide repeat-containing protein At2g01860... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 385 411
IPR002885 Pentatricopeptide_repeat 488 516
No external refs found!