Pnu_g18158


Description : RNA splicing regulator *(NSR) & original description: none


Gene families : OG0000722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000722_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18158
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Als_g11210 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07186 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16637 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05658 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
MA_121360g0010 No alias NSR RNA splicing regulator 0.01 OrthoFinder output from all 47 species
Msp_g24910 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07294 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g082710.4.1 Solyc03g082710 NSR RNA splicing regulator 0.02 OrthoFinder output from all 47 species
Solyc06g052080.4.1 Solyc06g052080 NSR RNA splicing regulator 0.02 OrthoFinder output from all 47 species
Spa_g06435 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024672_P001 Zm00001e024672 NSR RNA splicing regulator 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 136 205
No external refs found!