Pnu_g18128 (HTA6)

Aliases : HTA6

Description : histone *(H2A) & original description: none

Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g18128
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001085.4	GAMMA-H2AX,...	Chromatin organisation.histones.H2A-type histone	0.02	OrthoFinder output from all 47 species
Msp_g33284	HTA6	histone *(H2A) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g08324	HTA6	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g37051	HTA10	histone *(H2A) & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	96	129
IPR007125	Histone_H2A/H2B/H3	13	93

External Links

No external refs found!