Cpa|evm.model.tig00001416.4


Description : 20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3 (CLPB3)


Gene families : OG_01_0000281 (Gene family) Phylogenetic Tree(s): OG0000281_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00001416.4
Cluster HCCA cluster: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g08490 Os02g0181900 No description available 0.02 Gene family
LOC_Os03g31300 Os03g0426900 20.2.1 stress.abiotic.heat Encodes a... 0.03 Gene family
LOC_Os05g44340 Os05g0519700 No description available 0.02 Gene family
LOC_Os12g12850 Os12g0230100 No description available 0.01 Gene family
Smo147913 PACid_15408578 No description available 0.01 Gene family
Solyc03g115230.3.1 Solyc03g115230.3 No description available 0.01 Gene family
Zm00001d003847 GRMZM2G149567 29.5.5 protein.degradation.serine protease ATP-dependent... 0.01 Gene family
Zm00001d003894 GRMZM2G001084 No description available 0.01 Gene family
Zm00001d025273 GRMZM2G123922 No description available 0.03 Gene family
Zm00001d029557 GRMZM2G130121 20.2.1 stress.abiotic.heat Encodes a... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 676 799
IPR003959 ATPase_AAA_core 305 398
IPR004176 Clp_N 218 259
IPR004176 Clp_N 138 184
IPR019489 Clp_ATPase_C 806 846
No external refs found!