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  5. Gb_26634

Gb_26634


Description : exo-/endoribonuclease (RNase J)


Gene families : OG_01_0006288 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006288_tree ,
OG_02_0005831 (LandPlants) Phylogenetic Tree(s): OG_02_0005831_tree ,
OG_03_0005199 (SeedPlants) Phylogenetic Tree(s): OG_03_0005199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26634
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00241540 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.03 Archaeplastida
AT5G63420 emb2746 RNA-metabolising metallo-beta-lactamase family protein 0.03 Archaeplastida
GSVIVT01008515001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.06 Archaeplastida
LOC_Os02g33610.1 No alias exo-/endoribonuclease (RNase J) 0.03 Archaeplastida
MA_10429859g0010 No alias exo-/endoribonuclease (RNase J) 0.05 Archaeplastida
Mp3g10830.1 No alias exo-/endoribonuclease (RNase J) 0.08 Archaeplastida
Pp3c20_9790V3.1 No alias RNA-metabolising metallo-beta-lactamase family protein 0.04 Archaeplastida
Solyc03g111260.3.1 No alias exo-/endoribonuclease (RNase J) 0.03 Archaeplastida
Zm00001e013900_P001 No alias exo-/endoribonuclease (RNase J) 0.04 Archaeplastida
Zm00001e025070_P003 No alias exo-/endoribonuclease (RNase J) 0.02 Archaeplastida
AMTR_s00009p00241540 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.04 LandPlants
AT5G63420 emb2746 RNA-metabolising metallo-beta-lactamase family protein 0.03 LandPlants
GSVIVT01008515001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.06 LandPlants
LOC_Os02g33610.1 No alias exo-/endoribonuclease (RNase J) 0.03 LandPlants
MA_10429859g0010 No alias exo-/endoribonuclease (RNase J) 0.03 LandPlants
Mp3g10830.1 No alias exo-/endoribonuclease (RNase J) 0.07 LandPlants
Pp3c20_9790V3.1 No alias RNA-metabolising metallo-beta-lactamase family protein 0.03 LandPlants
Solyc03g111260.3.1 No alias exo-/endoribonuclease (RNase J) 0.03 LandPlants
Zm00001e013900_P001 No alias exo-/endoribonuclease (RNase J) 0.03 LandPlants
Zm00001e025070_P003 No alias exo-/endoribonuclease (RNase J) 0.02 LandPlants
AMTR_s00009p00241540 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.03 SeedPlants
AT5G63420 emb2746 RNA-metabolising metallo-beta-lactamase family protein 0.03 SeedPlants
GSVIVT01008515001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.06 SeedPlants
LOC_Os02g33610.1 No alias exo-/endoribonuclease (RNase J) 0.03 SeedPlants
MA_10429859g0010 No alias exo-/endoribonuclease (RNase J) 0.03 SeedPlants
MA_497021g0010 No alias exo-/endoribonuclease (RNase J) 0.01 SeedPlants
Solyc03g111260.3.1 No alias exo-/endoribonuclease (RNase J) 0.03 SeedPlants
Zm00001e013900_P001 No alias exo-/endoribonuclease (RNase J) 0.03 SeedPlants
Zm00001e025070_P003 No alias exo-/endoribonuclease (RNase J) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011108 RMMBL 457 504
IPR001279 Metallo-B-lactamas 124 260
No external refs found!