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  5. Pnu_g17909

Pnu_g17909


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g17909
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Adi_g057307 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Als_g40131 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Als_g57552 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29128.t1 ZFN1, Aspi01Gene29128 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g05215 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g26989 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Dcu_g06333 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Dcu_g13224 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
LOC_Os01g68860.1 ZFN1, LOC_Os01g68860 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os12g21700.1 ZFN1, LOC_Os12g21700 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_1139g0010 ZFN1 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g29158 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ore_g03223 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000536 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016888 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sam_g48703 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Solyc01g067550.3.1 Solyc01g067550 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc06g008740.3.1 Solyc06g008740 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc09g074640.3.1 Solyc09g074640 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Tin_g12609 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Zm00001e028479_P001 ZFN1, Zm00001e028479 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 85 110
No external refs found!