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  5. Pnu_g17901

Pnu_g17901


Description : not classified & original description: none


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g17901

Target Alias Description ECC score Gene Family Method Actions
AT2G22680 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 OrthoFinder output from all 47 species
AT4G37890 EDA40 Zinc finger (C3HC4-type RING finger) family protein 0.02 OrthoFinder output from all 47 species
Azfi_s0206.g057816 No alias not classified & original description: CDS=364-2808 0.04 OrthoFinder output from all 47 species
Len_g24093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g076860.3.1 Solyc04g076860 ubiquitin protein ligase (WAV3) 0.02 OrthoFinder output from all 47 species
Zm00001e000344_P001 Zm00001e000344 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e004621_P001 Zm00001e004621 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002035 VWF_A 312 489
IPR032838 Vwaint_dom 659 731
IPR001841 Znf_RING 81 110
No external refs found!