Gb_26474


Description : component alpha type-6 of 26S proteasome


Gene families : OG_01_0004156 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004156_tree ,
OG_02_0004577 (LandPlants) Phylogenetic Tree(s): OG_02_0004577_tree ,
OG_03_0005393 (SeedPlants) Phylogenetic Tree(s): OG_03_0005393_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26474
Cluster HCCA: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00165080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
AT1G47250 PAF2 20S proteasome alpha subunit F2 0.05 Archaeplastida
Cpa|evm.model.tig00000217.21 No alias Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
Cre06.g304300 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
GSVIVT01009737001 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
LOC_Os02g04100.1 No alias component alpha type-6 of 26S proteasome 0.02 Archaeplastida
MA_45005g0010 No alias Proteasome subunit alpha type-1-B OS=Arabidopsis... 0.03 Archaeplastida
Mp4g13080.1 No alias component alpha type-6 of 26S proteasome 0.05 Archaeplastida
Pp3c16_23890V3.1 No alias 20S proteasome alpha subunit F2 0.03 Archaeplastida
Smo158876 No alias Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
Solyc04g080590.4.1 No alias component alpha type-6 of 26S proteasome 0.04 Archaeplastida
Zm00001e013585_P001 No alias component alpha type-6 of 26S proteasome 0.03 Archaeplastida
AMTR_s00003p00165080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.03 LandPlants
AT1G47250 PAF2 20S proteasome alpha subunit F2 0.05 LandPlants
GSVIVT01009737001 No alias Protein degradation.26S proteasome.20S core... 0.03 LandPlants
LOC_Os02g04100.1 No alias component alpha type-6 of 26S proteasome 0.02 LandPlants
MA_10143842g0010 No alias Proteasome subunit alpha type-1-B OS=Arabidopsis... 0.02 LandPlants
MA_45005g0010 No alias Proteasome subunit alpha type-1-B OS=Arabidopsis... 0.03 LandPlants
Mp4g13080.1 No alias component alpha type-6 of 26S proteasome 0.04 LandPlants
Pp3c16_23890V3.1 No alias 20S proteasome alpha subunit F2 0.03 LandPlants
Smo158876 No alias Protein degradation.26S proteasome.20S core... 0.02 LandPlants
Solyc04g080590.4.1 No alias component alpha type-6 of 26S proteasome 0.04 LandPlants
Zm00001e013585_P001 No alias component alpha type-6 of 26S proteasome 0.02 LandPlants
AMTR_s00003p00165080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.03 SeedPlants
AT1G47250 PAF2 20S proteasome alpha subunit F2 0.05 SeedPlants
GSVIVT01009737001 No alias Protein degradation.26S proteasome.20S core... 0.03 SeedPlants
LOC_Os02g04100.1 No alias component alpha type-6 of 26S proteasome 0.02 SeedPlants
MA_10143842g0010 No alias Proteasome subunit alpha type-1-B OS=Arabidopsis... 0.02 SeedPlants
MA_45005g0010 No alias Proteasome subunit alpha type-1-B OS=Arabidopsis... 0.03 SeedPlants
Solyc04g080590.4.1 No alias component alpha type-6 of 26S proteasome 0.04 SeedPlants
Zm00001e013585_P001 No alias component alpha type-6 of 26S proteasome 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 6 28
IPR001353 Proteasome_sua/b 29 214
No external refs found!