AMTR_s00002p00271790 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.638

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.SEC22-type protein


Gene families : OG_01_0003506 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003506_tree ,
OG_02_0003474 (LandPlants) Phylogenetic Tree(s): OG_02_0003474_tree ,
OG_03_0003456 (SeedPlants) Phylogenetic Tree(s): OG_03_0003456_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00271790
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cre12.g554700 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
LOC_Os06g09850.1 No alias SEC22-type R-type SNARE longin protein 0.03 Archaeplastida
Zm00001e016377_P002 No alias SEC22-type R-type SNARE longin protein 0.03 Archaeplastida
LOC_Os06g09850.1 No alias SEC22-type R-type SNARE longin protein 0.03 LandPlants
Zm00001e016377_P002 No alias SEC22-type R-type SNARE longin protein 0.03 LandPlants
Zm00001e016377_P002 No alias SEC22-type R-type SNARE longin protein 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010908 Longin_dom 35 119
IPR001388 Synaptobrevin 133 191
No external refs found!