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  5. Gb_26404

Gb_26404


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 303.0)


Gene families : OG_01_0000380 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000380_tree ,
OG_02_0000225 (LandPlants) Phylogenetic Tree(s): OG_02_0000225_tree ,
OG_03_0021138 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26404
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00135240 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00156p00066850 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G24130 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
AT2G26490 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
AT3G50390 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
AT3G51930 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
GSVIVT01007589001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01035639001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os01g13140.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429909g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10431396g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10431396g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_107471g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_1936904g0010 No alias No annotation 0.04 Archaeplastida
MA_3692384g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_370291g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_634003g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_913477g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c11_2770V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Pp3c4_25840V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g068250.2.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc01g109120.3.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g111780.1.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g044320.2.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g088980.2.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e003105_P001 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e012074_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015781_P001 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e041085_P001 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
AT2G26490 No alias Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
AT3G50390 No alias Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 LandPlants
MA_10429909g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_1936904g0010 No alias No annotation 0.04 LandPlants
MA_370291g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 LandPlants
MA_634003g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 LandPlants
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 LandPlants
Solyc01g109120.3.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 LandPlants
Solyc03g111780.1.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 LandPlants
Solyc12g044320.2.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 LandPlants
Solyc12g088980.2.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 LandPlants
Zm00001e015781_P001 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e041085_P001 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 LandPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 359 388
IPR001680 WD40_repeat 398 438
IPR001680 WD40_repeat 309 344
IPR001680 WD40_repeat 110 144
IPR001680 WD40_repeat 263 298
IPR001680 WD40_repeat 225 257
No external refs found!