Aliases : PTB2, ATPTB2
Description : RNA splicing factor *(PTB) & original description: none
Gene families : OG0001527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001527_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pnu_g17556 | |
Cluster | HCCA: Cluster_29 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g08362 | PTB2, ATPTB2 | RNA splicing factor *(PTB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g08278 | PTB2, ATPTB2 | RNA splicing factor *(PTB) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | HCCA |
BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
BP | GO:0009112 | nucleobase metabolic process | IEP | HCCA |
MF | GO:0016829 | lyase activity | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | HCCA |
MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0046112 | nucleobase biosynthetic process | IEP | HCCA |
MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
No external refs found! |