Pnu_g17531 (MSI1, MEE70, ATMSI1)


Aliases : MSI1, MEE70, ATMSI1

Description : component *(MSI1) of PRC2 histone methylation complex & original description: none


Gene families : OG0001615 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001615_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g17531

Target Alias Description ECC score Gene Family Method Actions
Aob_g05086 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.05 OrthoFinder output from all 47 species
Cba_g16882 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.03 OrthoFinder output from all 47 species
Ceric.19G025100.1 MSI1, MEE70,... component *(MSI1) of PRC2 histone methylation complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01024023001 NFC3, MSI3 Chromatin organisation.histone chaperone activities.CAF1... 0.05 OrthoFinder output from all 47 species
Msp_g02039 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g00848 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 367 402
IPR001680 WD40_repeat 308 346
IPR001680 WD40_repeat 264 302
IPR022052 Histone-bd_RBBP4_N 19 88
No external refs found!