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  5. Pnu_g17463

Pnu_g17463


Description : substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g17463

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00227540 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G78100 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
Aev_g04813 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene64471.t1 Aspi01Gene64471 substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g04831 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g09750 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Gb_19868 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
LOC_Os01g59690.1 LOC_Os01g59690 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
LOC_Os03g20500.1 LOC_Os03g20500 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Ore_g01056 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g09598 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e032100_P001 Zm00001e032100 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!