MA_75133g0010


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. CHLORORESPIRATORY REDUCTION22 (CRR22)


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_75133g0010
Cluster HCCA cluster: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G12770 MEF22 mitochondrial editing factor 22 0.03 Gene family
AT4G14170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT5G47460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
GSVIVT01000968001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01007645001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01009407001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01009789001 No alias No description available 0.04 Gene family
GSVIVT01009974001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01011735001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01015087001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
GSVIVT01015325001 No alias No description available 0.03 Gene family
GSVIVT01024588001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01030054001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01033004001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
GSVIVT01035618001 No alias No description available 0.03 Gene family
GSVIVT01037332001 No alias No description available 0.05 Gene family
LOC_Os01g01115 Os01g0101150 No description available 0.05 Gene family
LOC_Os01g41650 Os01g0600400 No description available 0.02 Gene family
LOC_Os02g44480 Os02g0663900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os03g11700 Os03g0216400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os03g16450 Os03g0271300 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os04g35650 Os04g0436800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
LOC_Os04g43430 Os04g0514500 No description available 0.03 Gene family
LOC_Os05g05490 Os05g0147600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
LOC_Os07g05560 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os08g38610 Os08g0494200,... No description available 0.05 Gene family
LOC_Os08g40020 Os08g0511000 No description available 0.03 Gene family
LOC_Os11g01836 Os11g0109600 No description available 0.04 Gene family
LOC_Os11g45410 Os11g0679900,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os12g01850 Os12g0109300 No description available 0.06 Gene family
LOC_Os12g06650 Os12g0163600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_10164206g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_10426261g0020 No alias No description available 0.05 Gene family
MA_105629g0010 No alias 35.1.27 not assigned.no ontology.tetratricopeptide... 0.04 Gene family
MA_135075g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_16226g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_177435g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_18383g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_67032g0010 No alias No description available 0.02 Gene family
MA_77675g0010 No alias No description available 0.04 Gene family
MA_9258g0010 No alias No description available 0.08 Gene family
Solyc01g006920.3.1 Solyc01g006920.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc01g010510.3.1 Solyc01g010510.3 No description available 0.02 Gene family
Solyc02g088650.1.1 Solyc02g088650.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc03g063160.1.1 Solyc03g063160.1 No description available 0.02 Gene family
Solyc06g082880.2.1 Solyc06g082880.2 No description available 0.03 Gene family
Solyc08g078570.2.1 Solyc08g078570.2 No description available 0.02 Gene family
Solyc11g005960.1.1 Solyc11g005960.1 No description available 0.02 Gene family
Solyc11g008970.1.1 Solyc11g008970.1 No description available 0.02 Gene family
Zm00001d003047 GRMZM2G077420 No description available 0.03 Gene family
Zm00001d013941 GRMZM2G073017 No description available 0.03 Gene family
Zm00001d017518 GRMZM2G014977 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d020825 GRMZM5G851929 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d025656 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d028422 GRMZM2G019689 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d030143 GRMZM2G430710 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d033495 GRMZM5G849971 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d034933 No alias No description available 0.06 Gene family
Zm00001d037254 GRMZM2G060337 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d037891 No alias No description available 0.04 Gene family
Zm00001d039873 GRMZM2G380195 No description available 0.02 Gene family
Zm00001d042039 GRMZM2G060536 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d044547 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d051816 GRMZM2G029859 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 122 142
IPR002885 Pentatricopeptide_repeat 322 347
IPR002885 Pentatricopeptide_repeat 625 648
IPR002885 Pentatricopeptide_repeat 690 719
IPR032867 DYW_dom 723 779
IPR002885 Pentatricopeptide_repeat 246 293
IPR002885 Pentatricopeptide_repeat 550 597
IPR002885 Pentatricopeptide_repeat 145 193
IPR002885 Pentatricopeptide_repeat 349 395
IPR002885 Pentatricopeptide_repeat 448 492
No external refs found!