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  5. AMTR_s00044p00087550

AMTR_s00044p00087550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.60

Description : Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidopsis thaliana


Gene families : OG_01_0010121 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010121_tree ,
OG_02_0010541 (LandPlants) Phylogenetic Tree(s): OG_02_0010541_tree ,
OG_03_0010187 (SeedPlants) Phylogenetic Tree(s): OG_03_0010187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00087550
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT2G26790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
Gb_41674 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.02 Archaeplastida
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.07 Archaeplastida
Zm00001e039987_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.04 Archaeplastida
AT1G13800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
AT2G26790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 LandPlants
GSVIVT01015849001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.02 LandPlants
Gb_41674 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.02 LandPlants
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.06 LandPlants
AT1G13800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 SeedPlants
AT2G26790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 SeedPlants
GSVIVT01015849001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.02 SeedPlants
Gb_41674 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.02 SeedPlants
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.05 SeedPlants
Zm00001e039987_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 552 582
IPR002885 Pentatricopeptide_repeat 308 336
IPR002885 Pentatricopeptide_repeat 448 480
IPR002885 Pentatricopeptide_repeat 658 687
IPR002885 Pentatricopeptide_repeat 156 180
IPR002885 Pentatricopeptide_repeat 214 233
IPR002885 Pentatricopeptide_repeat 593 640
IPR002885 Pentatricopeptide_repeat 696 744
IPR002885 Pentatricopeptide_repeat 241 290
IPR002885 Pentatricopeptide_repeat 348 395
IPR002885 Pentatricopeptide_repeat 780 826
IPR002885 Pentatricopeptide_repeat 486 535
No external refs found!