Pnu_g16997


Description : not classified & original description: none


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16997
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Dcu_g04781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_166400g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g08154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_26270V3.1 Pp3c4_26270 FRIGIDA-like protein 0.01 OrthoFinder output from all 47 species
Ppi_g03087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo115612 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 234 526
No external refs found!