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  5. Pnu_g16780

Pnu_g16780 (emb2746)


Aliases : emb2746

Description : not classified & original description: none


Gene families : OG0000670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000670_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16780

Target Alias Description ECC score Gene Family Method Actions
Aev_g09158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44430.t1 Aspi01Gene44430 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g02825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03238 emb2746 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427358g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10427358g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g11912 AT-GT2, GT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 386 466
IPR044822 Myb_DNA-bind_4 122 201
No external refs found!