1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g64124

Als_g64124


Description : component *(eS12) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g64124
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT1G15930 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 OrthoFinder output from all 47 species
Ala_g12283 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ala_g32040 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020903.34 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre04.g214503 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g23793 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ehy_g03052 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01034219001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_19269 No alias component RPS12 of SSU proteome 0.04 OrthoFinder output from all 47 species
Gb_38833 No alias component RPS12 of SSU proteome 0.04 OrthoFinder output from all 47 species
Len_g05775 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Mp7g11470.1 No alias component RPS12 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc12g042650.2.1 Solyc12g042650 component RPS12 of SSU proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 27 113
No external refs found!