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  5. Als_g63583

Als_g63583


Description : rRNA adenosine dimethylase *(DIM1A) & original description: none


Gene families : OG0002989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g63583

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00244930 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00156590 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
Adi_g050774 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14002 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02616 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018854001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder output from all 47 species
LOC_Os07g32550.1 LOC_Os07g32550 rRNA adenosine dimethylase (DIM1B) 0.03 OrthoFinder output from all 47 species
Len_g22299 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05925 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17004 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.03 OrthoFinder output from all 47 species
Smo116036 No alias RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder output from all 47 species
Solyc02g084730.3.1 Solyc02g084730 rRNA adenosine dimethylase (DIM1B) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 102 314
No external refs found!