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  5. Als_g63266

Als_g63266 (GT-1)


Aliases : GT-1

Description : Trihelix-type transcription factor & original description: none


Gene families : OG0003320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g63266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00185670 GT-1,... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
Ceric.24G053900.1 GT-1, Ceric.24G053900 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g11050 GT-1 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15532 GT-1 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g18041 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26978 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g077540.3.1 GT-1, Solyc12g077540 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Tin_g11055 GT-1 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 41 124
No external refs found!