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  5. Als_g62775

Als_g62775 (RPS11)


Aliases : RPS11

Description : not classified & original description: none


Gene families : OG0004584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g62775

Target Alias Description ECC score Gene Family Method Actions
ATCG00750 RPS11 ribosomal protein S11 0.05 OrthoFinder output from all 47 species
Aev_g01915 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Aev_g37240 RPS11 component *(uS11c) of small plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Ala_g07144 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Aop_g18582 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Azfi_s0027.g023689 No alias not classified & original description: CDS=1-321 0.05 OrthoFinder output from all 47 species
Cba_g15340 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Ceric.05G042000.1 RPS11, Ceric.05G042000 component *(uS11c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.05G049400.1 RPS11, Ceric.05G049400 component *(uS11c) of small plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Ceric.1Z122600.1 RPS11, Ceric.1Z122600 not classified & original description: pacid=50617110... 0.12 OrthoFinder output from all 47 species
Ceric.1Z196300.1 RPS11, Ceric.1Z196300 not classified & original description: pacid=50586509... 0.12 OrthoFinder output from all 47 species
Ceric.1Z237100.1 RPS11, Ceric.1Z237100 not classified & original description: pacid=50569351... 0.12 OrthoFinder output from all 47 species
Gb_08606 NFD3 component mtRPS11 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
LOC_Os04g16838.1 RPS11, LOC_Os04g16838 component psRPS11 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
LOC_Os10g21332.1 RPS11, LOC_Os10g21332 component psRPS11 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Len_g39780 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Mp4g09870.1 No alias Ribosomal protein S11, mitochondrial OS=Marchantia... 0.05 OrthoFinder output from all 47 species
Mpzg00730.1 No alias component psRPS11 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Nbi_g20255 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.2 OrthoFinder output from all 47 species
Pir_g07424 RPS11 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g02162 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Tin_g21094 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0042773 ATP synthesis coupled electron transport IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 65 118
No external refs found!