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  5. Als_g62719

Als_g62719 (HUA1)


Aliases : HUA1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0002527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g62719

Target Alias Description ECC score Gene Family Method Actions
Adi_g060210 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016300.1 HUA1, Ceric.30G016300 regulatory protein of RNA homeostasis & original... 0.06 OrthoFinder output from all 47 species
Ehy_g07725 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Gb_15324 HUA1 C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Lfl_g24666 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Lfl_g29415 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
MA_8911g0010 HUA1 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Ore_g33880 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ore_g43399 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g07887 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ppi_g12544 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Solyc12g017410.2.1 HUA1, Solyc12g017410 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g15555 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 269 294
IPR000571 Znf_CCCH 188 212
IPR000571 Znf_CCCH 135 158
IPR000571 Znf_CCCH 406 431
IPR000571 Znf_CCCH 357 381
No external refs found!