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  5. Als_g62535

Als_g62535 (AAT1, CAT1)


Aliases : AAT1, CAT1

Description : cationic amino acid transporter *(CAT) & original description: none


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g62535
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00137590 CAT7,... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Azfi_s0132.g049200 CAT7 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Cba_g05204 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G082000.1 ATCAT6, CAT6,... cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g05972 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g081850.4.1 CAT5, Solyc02g081850 cationic amino acid transporter (CAT) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 57 451
IPR029485 CAT_C 496 546
No external refs found!