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  5. Als_g61760

Als_g61760


Description : histone H3 variant *(CENH3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g61760

Target Alias Description ECC score Gene Family Method Actions
AT4G40040 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G65350 HTR11 histone 3 11 0.06 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02052.t1 Aspi01Gene02052 histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14635.t1 Aspi01Gene14635 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58554.t1 Aspi01Gene58554 histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02423 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g648500 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Mp7g16200.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Msp_g00861 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33278 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25338 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33705 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04242 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04797 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09717 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25835 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018263_P001 Zm00001e018263 histone (H3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 77 202
No external refs found!