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  5. Als_g61569

Als_g61569 (PUB26)


Aliases : PUB26

Description : not classified & original description: none


Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g61569

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00199950 evm_27.TU.AmTr_v1... U-box domain-containing protein 31 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00017p00223570 PUB26,... U-box domain-containing protein 26 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00130440 CMPG2, ATCMPG2,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00159240 PUB23,... E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00138p00053700 evm_27.TU.AmTr_v1... U-box domain-containing protein 21 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G02840 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G11840 PUB24 plant U-box 24 0.04 OrthoFinder output from all 47 species
AT3G52450 PUB22 plant U-box 22 0.04 OrthoFinder output from all 47 species
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.04 OrthoFinder output from all 47 species
Adi_g003285 PUB25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g107693 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02169 PUB23 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02974 PUB23 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16119 PUB25 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18167 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02187 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05204 PUB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06990 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20026 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10929 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11423 PUB15 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23185 CMPG1, ATCMPG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g57047 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60936 PUB25 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12417 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15330 PUB26 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g16033 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04412 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15171.t1 PUB29, ATPUB29,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18444.t1 PUB23, Aspi01Gene18444 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18451.t1 PUB25, Aspi01Gene18451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18452.t1 PUB25, Aspi01Gene18452 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18453.t1 PUB25, Aspi01Gene18453 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18467.t1 PUB23, Aspi01Gene18467 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19355.t1 PUB26, Aspi01Gene19355 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33499.t1 PUB25, Aspi01Gene33499 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44311.t1 PUB22, Aspi01Gene44311 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44314.t1 PUB23, Aspi01Gene44314 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44315.t1 PUB23, Aspi01Gene44315 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44316.t1 PUB23, Aspi01Gene44316 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44317.t1 PUB23, Aspi01Gene44317 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44318.t1 PUB23, Aspi01Gene44318 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44320.t1 PUB23, Aspi01Gene44320 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44321.t1 PUB23, Aspi01Gene44321 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene51615.t1 PUB15, Aspi01Gene51615 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67880.t1 PUB26, Aspi01Gene67880 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g038964 PUB25 U-Box-group-III E3 ubiquitin ligase & original... 0.04 OrthoFinder output from all 47 species
Ceric.07G004600.1 PUB26, Ceric.07G004600 E3 ubiquitin ligase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.08G042000.1 Ceric.08G042000 E3 ubiquitin ligase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.08G065500.1 PUB26, Ceric.08G065500 U-Box-group-III E3 ubiquitin ligase & original... 0.07 OrthoFinder output from all 47 species
Ceric.10G007700.1 PUB23, Ceric.10G007700 not classified & original description: pacid=50612519... 0.06 OrthoFinder output from all 47 species
Ceric.19G059800.1 PUB26, Ceric.19G059800 not classified & original description: pacid=50575490... 0.03 OrthoFinder output from all 47 species
Ceric.21G081600.1 PUB26, Ceric.21G081600 U-Box-group-III E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Dac_g07515 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01209 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01521 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07421 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11691 PUB26 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26825 PUB26 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g46168 PUB23 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g01464 PUB26 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03660 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14998 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16036 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16356 PUB22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011139001 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011140001 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011616001 CMPG1, ATCMPG1 U-box domain-containing protein 20 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031720001 PUB26 U-box domain-containing protein 26 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_02628 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_02629 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_29938 CMPG2, ATCMPG2 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64570.1 PUB23, LOC_Os01g64570 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g34410.1 PUB25, LOC_Os02g34410 U-box domain-containing protein 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g46500.1 PUB23, LOC_Os02g46500 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g50460.1 LOC_Os02g50460 U-box domain-containing protein 20 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g13740.1 LOC_Os03g13740 U-box domain-containing protein 20 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g34140.1 PUB29, ATPUB29,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g06410.1 PUB24, LOC_Os12g06410 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g09678 PUB25 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g31416 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430196g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_126399g0010 PUB26 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_415393g0010 PUB25 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_84154g0010 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_8837995g0010 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g06090.1 PUB25 E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species
Mp3g22750.1 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp7g11020.1 PUB25 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Msp_g11599 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12974 PUB25 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25038 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35056 PUB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38744 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g47390 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37574 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08919 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21647 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29206 PUB25 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29544 PUB23 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36530 PUB23 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44415 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12470 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g15483 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27378 PUB23 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34239 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19356 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020660 No alias not classified & original description: CDS=1-1503 0.03 OrthoFinder output from all 47 species
Smo104879 PUB25 U-box domain-containing protein 25 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g007000.4.1 PUB22, Solyc01g007000 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc01g007030.3.1 PUB22, Solyc01g007030 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g008100.3.1 Solyc04g008100 U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g071030.1.1 Solyc04g071030 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Solyc11g005700.1.1 CMPG2, ATCMPG2,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Spa_g00706 PUB23 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g03410 PUB26 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47017 PUB23 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e014779_P001 PUB26, Zm00001e014779 U-box domain-containing protein 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e015763_P001 Zm00001e015763 U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e036030_P001 Zm00001e036030 U-box domain-containing protein 21 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e039417_P001 PUB23, Zm00001e039417 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e040854_P001 CMPG2, ATCMPG2,... U-box domain-containing protein 29 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e041397_P001 PUB23, Zm00001e041397 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 13 77
No external refs found!