Als_g59488

Description : not classified & original description: none

Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g59488

Target	Alias	Description	ECC score	Gene Family Method
Adi_g024938	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g061008	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g076970	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g098877	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g14020	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g27974	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g14828	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g20550	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene38616.t1	Aspi01Gene38616	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene38622.t1	Aspi01Gene38622	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene42682.t1	Aspi01Gene42682	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Cba_g05976	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07758	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Cba_g62281	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.02G079000.1	Ceric.02G079000	not classified & original description: pacid=50585939...	0.02	OrthoFinder output from all 47 species
Ceric.14G049600.1	Ceric.14G049600	not classified & original description: pacid=50633231...	0.06	OrthoFinder output from all 47 species
Ceric.1Z097100.1	Ceric.1Z097100	not classified & original description: pacid=50640984...	0.06	OrthoFinder output from all 47 species
Dcu_g13726	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g21489	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g31555	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g04007	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_15617	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_15618	No alias	ATPase family AAA domain-containing protein FIGL1...	0.03	OrthoFinder output from all 47 species
LOC_Os11g43970.1	LOC_Os11g43970	ATPase family AAA domain-containing protein FIGL1...	0.02	OrthoFinder output from all 47 species
Len_g20111	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Lfl_g04238	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g17632	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_10428622g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_48428g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Msp_g24317	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g48935	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g08137	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g04513	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g110900.4.1	Solyc03g110900	ATPase family AAA domain-containing protein FIGL1...	0.03	OrthoFinder output from all 47 species
Solyc09g074950.3.1	Solyc09g074950	ATPase family AAA domain-containing protein FIGL1...	0.03	OrthoFinder output from all 47 species
Tin_g13557	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e001631_P001	Zm00001e001631	ATPase family AAA domain-containing protein FIGL1...	0.02	OrthoFinder output from all 47 species
Zm00001e011359_P005	Zm00001e011359	ATPase family AAA domain-containing protein FIGL1...	0.06	OrthoFinder output from all 47 species
Zm00001e021043_P002	Zm00001e021043	ATPase family AAA domain-containing protein FIGL1...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000253	FHA_dom	129	197
IPR003959	ATPase_AAA_core	958	1087
IPR041569	AAA_lid_3	1111	1147

External Links

No external refs found!

Als_g59488

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation