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  5. Als_g59230

Als_g59230 (ZFN1)


Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g59230

Target Alias Description ECC score Gene Family Method Actions
Aop_g01684 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene59535.t1 ZFN1, Aspi01Gene59535 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07764 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01017774001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Gb_37448 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os01g68860.1 ZFN1, LOC_Os01g68860 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_137427g0010 ZFN1 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g03707 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ore_g07740 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Spa_g18106 ZFN1 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Spa_g21682 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Zm00001e025563_P001 Zm00001e025563 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 357 382
IPR000571 Znf_CCCH 93 118
IPR000571 Znf_CCCH 185 209
IPR000571 Znf_CCCH 139 163
IPR000571 Znf_CCCH 407 427
No external refs found!