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Aliases : RACK1C_AT
Description : component *(RACK1) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0002231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002231_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00105p00058690 | RACK1B_AT,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G18080 | ATARCA, RACK1A, RACK1A_AT | Transducin/WD40 repeat-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT1G48630 | RACK1B_AT | receptor for activated C kinase 1B | 0.07 | OrthoFinder output from all 47 species | |
| AT3G18130 | RACK1C_AT | receptor for activated C kinase 1C | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g00477 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g06871 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Azfi_s0113.g045894 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.02G088700.1 | RACK1C_AT,... | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Ceric.34G016800.1 | RACK1C_AT,... | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000169.6 | RACK1C_AT | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Cre06.g278222 | RACK1C_AT | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01008395001 | MYB4R1, AtMYB4R1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os01g49290.1 | RACK1C_AT, LOC_Os01g49290 | associated component RACK1 of SSU proteome | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os05g47890.1 | RACK1C_AT, LOC_Os05g47890 | associated component RACK1 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Len_g12989 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05286 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10435947g0010 | RACK1B_AT | Guanine nucleotide-binding protein subunit beta-like... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g15630.1 | RACK1C_AT | associated component RACK1 of SSU proteome | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g08733 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06109 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04455 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g25423 | RACK1B_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g33109 | RID3 | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19034 | No alias | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo266532 | RACK1C_AT | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g119040.3.1 | RACK1B_AT, Solyc03g119040 | associated component RACK1 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g069010.3.1 | RACK1B_AT, Solyc06g069010 | associated component RACK1 of SSU proteome | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g16013 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g25399 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g45000 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e026456_P001 | RACK1C_AT, Zm00001e026456 | associated component RACK1 of SSU proteome | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e032340_P001 | RACK1C_AT, Zm00001e032340 | associated component RACK1 of SSU proteome | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| No external refs found! |